gretapy.ds.read_metrics

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gretapy.ds.read_metrics#

gretapy.ds.read_metrics(remove_paired=True, verbose=False)#

Read the GRN benchmark metrics table.

Downloads the metrics file if not already cached locally, then loads and preprocesses it. Column names are standardized, and optionally paired datasets are removed.

Parameters:

  • remove_paired (bool (default: True)) – Whether to remove paired datasets (‘Synthetic Pituitary’ and ‘Unpaired Pituitary’) from the results. Default is True.

  • verbose (bool (default: False)) – Whether to print progress messages. Default is False.

Return type:

DataFrame

Returns:

pd.DataFrame A DataFrame with columns: name, organism, dataset, task, db, precision, recall, and any other columns present in the source file.

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