gretapy.ds.read_dts

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gretapy.ds.read_dts#

gretapy.ds.read_dts(organism, dts_name, verbose=False)#

Read a dataset for a given organism.

Downloads the dataset if not already cached locally, then reads it as a MuData object.

Parameters:

  • organism (str) – The organism identifier (e.g., ‘hg38’ for human).

  • dts_name (str) – The name of the dataset to read (e.g., ‘pbmc10k’, ‘brain’).

  • verbose (bool (default: False)) – Whether to print progress messages. Default is False.

Return type:

MuData

Returns:

mu.MuData The loaded dataset as a MuData object containing ‘rna’ and ‘atac’ modalities.

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